Transcriptomic profiles of intestinal stem cells cultured in natural and synthetic three-dimensional matrices

Direct links to NCBI, no account and no request form: the whole study as GSE85391_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 9 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA338315 and SRA study SRP081167. Searching any of these in the dataset finder brings you back here.

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+ 9 more — browse all 9 samples with per-sample file links →

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• GSE185862 A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation 95 samples
• GSE325548 Time-resolved transcriptomic profiling of surgical wounds identifies stage-specific therapeutic targets for residual ovarian cancer 48 samples
• GSE319769 Transcriptomic profiling of the intra-amygdala kainate mouse model across the stages of epileptogenesis 36 samples
• GSE309993 Effector differentiation by stem-like intraepithelial γδ T cells is required for host defense against infection 25 samples
• GSE327176 Single-cell transcriptomic profiling unveils tumor-mediated reprogramming of neutrophils and their unique vulnerability that inhibits metastasis 25 samples
• GSE292862 Modelling mouse embryogenesis from chemically induced totipotent stem cells 22 samples
• GSE341948 Multi-tissue transcriptomic landscape reveals synergistic mechanisms of exercise and GLP-1 agonist in ameliorating diabetic phenotypes in db/db mice 12 samples

Search all mouse RNA-seq datasets in GEO →