Gene expression profiling of testicular seminoma
Expression microarray · human · 43 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Topic
- Testicular cancerThis series is part of our curated briefing on it.
- Samples
- 43 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE8607_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA101777. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 43 more — browse all 43 samples with per-sample file links →
- GSE197778 Single-cell RNA sequencing of metastatic testicular seminoma reveals the cellular and molecular characteristics of metastatic cell lineage 4 samples same disease briefing · shares testicular, seminoma
- GSE256162 Transcriptional and epigenetic changes from the genesis of the human male germline through to adulthood provide a map of prenatal and postnatal molecular drivers of differentiation and reveal the developmental origin of seminoma. 50 samples same disease briefing · shares seminoma
- GSE278498 Refractory testicular germ cell tumors are highly sensitive to the targeting of polycomb pathway demethylases KDM6A and KDM6B 36 samples same disease briefing · shares testicular
- GSE317098 Comparative analysis of the transcriptomic response to cisplatin in drug-sensitive and drug-resistant testicular germ cell tumors. 30 samples same disease briefing · shares testicular
- GSE232791 Role of MIR9-2 in testicular germ cell tumours 16 samples same disease briefing · shares testicular
- GSE282367 BRD9 inhibition as potential treatment option for testicular germ cell tumors 12 samples same disease briefing · shares testicular
- GSE228501 Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment 4 samples same disease briefing · shares testicular
- GSE261811 T cells in testicular germ cell tumors: new evidence of fundamental contributions by rare subsets 4 samples same disease briefing · shares testicular
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.