A Compendium of Chromatin Contact Maps Reveal Spatially Active Regions in the Human Genome

Direct links to NCBI, no account and no request form: the whole study as GSE87112_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 19 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA343608 and SRA study SRP090175. Searching any of these in the dataset finder brings you back here.

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+ 19 more — browse all 19 samples with per-sample file links →

• GSE241602 Dynamic Chromatin Alteration Induces Oncogenic Hijacking by Nuclear Factor I Family Proteins for Medulloblastoma Progression 30 samples
• GSE268567 Single-cell parallel analysis of DNA damage and transcriptome reveals selective genome vulnerability 30 samples
• GSE260997 Mutant IDH inhibitors induce lineage differentiation in IDH-mutant Oligodendroglioma III 2458 samples
• GSE202126 Single-cell Total-RNA Profiling Unveils Regulatory Hubs of Transcription Factors 1089 samples
• GSE307112 Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [I] 886 samples
• GSE327497 Localized PD-1 CAR T therapy reprograms neuroinflammation. 390 samples
• GSE289991 Persistent dopamine-dependent remodeling of the neural transcriptome in response to pregnancy and postpartum [bulk RNA-seq] 294 samples
• GSE277025 Inhaled Xenon modulates microglia and ameliorates disease in mouse models of amyloidosis and tauopathy 192 samples

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