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Distinct mesenchymal lineages and niches promote epithelial self-renewal and myofibrogenesis in the lung

GSE92699 Mus musculus Expression profiling by high throughput sequencing 10 samples Submitted 2017/09/11 Platform GPL13112
Summary
Using flourescence activated cell sorting, we gated on cells negative for CD45, CD326 and CD31, from single cell suspension generated from Adult mice. We then isolated subsets of YFP-, GFP- or TdTomato expressing cells from the indicated reporter mice. tdTomato indicates Wnt-responsive cells, GFP reports Pdgfr-alpha expression and YFP- was used to isolate lineaged Wnt2-positive cells. Additionally we included cells that were negative for the aforementioned reporters. We performed RNAseq on biological duplicates for each subset.
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Direct links to NCBI, no account and no request form: the whole study as GSE92699_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 10 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA358398 and SRA study SRP095461. Searching any of these in the dataset finder brings you back here.

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