The dynamics of gene expression in vertebrate embryogenesis at single cell resolution

Direct links to NCBI, no account and no request form: the whole study as GSE113074_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 75 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA449931 and SRA study SRP142544. Searching any of these in the dataset finder brings you back here.

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 75 more — browse all 75 samples with per-sample file links →

• GSE65785 Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development 193 samples
• GSE56242 High-resolution analysis of gene activity during the Xenopus mid-blastula transition 52 samples
• GSE67974 Embryonic transcription is controlled by maternally defined chromatin state 72 samples
• GSE122551 The Spatiotemporal Control of Zygotic Genome Activation 52 samples
• GSE232070 CANTAC-seq analysis reveals the maternal factors E2f1 and Otx1 co-modulate minor zygotic gene transcription by a seesaw model (RNA-Seq) 44 samples
• GSE37452 RNA sequencing reveals diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development. 40 samples
• GSE82019 BRG1 Chromatin Remodeling ATPase Balances Germ Layer Patterning by Amplifying the Transcriptional Burst at Midblastula Transition 14 samples
• GSE81458 Regional expression of X. tropicalis transcription factors in early gastrula embryos 12 samples

Search all RNA-seq datasets in GEO →