Gene expression in mouse tracheal basal cells
Expression microarray · mouse · 9 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Mus musculus (mouse)
- Samples
- 9 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE15724_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA116615. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 9 more — browse all 9 samples with per-sample file links →
- GSE253023 Mouse tracheal pseudostratified vs hillock basal stem cells 6 samples shares tracheal, basal
- GSE253021 RNAseq transcriptomic comparison of mouse tracheal pseudostratified vs hillock basal stem cells 4 samples shares tracheal, basal
- GSE300742 Single-cell transcriptome profiling of tracheal epithelium in basal cell-specific Mettl3 conditional knockout mice 4 samples shares tracheal, basal
- GSE61091 p63+/Krt5+ Distal Airway Stem Cells are Essential for Lung Regeneration (tracheal epithelium and alveoli) 6 samples shares tracheal
- GSE294013 ERG-driven gene expression in basal and luminal cells of mouse prostate organoids 12 samples shares basal
- GSE280283 The gene expression profiles of SOX9+ basal cells (BCs) compared to basal cells during the ALT injury/regeneration process in the surface airway epithelium (SAE). 16 samples shares basal
- GSE286046 Asymmetric Histone Inheritance Regulates Differential Transcription Re-initiation and Cell Fate Decisions in Mouse Olfactory Horizontal Basal Cells 96 samples shares basal
- GSE240498 Gene expression analysis during mouse airway basal cell differentiation 9 samples shares basal
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.