Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients(10x RNA and TCR)

Direct links to NCBI, no account and no request form: the whole study as GSE167036_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 32 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA702767 and SRA study SRP306993. Searching any of these in the dataset finder brings you back here.

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+ 32 more — browse all 32 samples with per-sample file links →

• GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
• GSE319641 RNA-Seq profiling of pre- and on-treatment tumor samples from breast cancer patients enrolled in the NeoTRIP trial. 401 samples
• GSE294300 Single-cell gene expression profiles of cells from primary colorectal cancer and adjacent normal tissue [scRNA-Seq] 36 samples
• GSE267718 Single cell RNA sequencing (scRNAseq) of urine-derived cells, peripheral blood mononuclear (PBMC), and tumor cells from bladder cancer patients. 33 samples
• GSE228598 Gene expression profile at single cell level of Peritoneal Cells in Patients with Gastric Cancer 28 samples
• GSE303346 Single-Cell RNA-Seq Reveals Immunosuppressive Effects of Triple-Negative Breast Cancer–Derived Exosomes on NK Cell Responses 16 samples
• GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
• GSE323973 Expression profiling by high throughput sequencing of breast cancer 158 samples

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