GEO series
mesendoderm differentiation with Hif-1a knockdown
GSE200739
Mus musculus
Expression profiling by high throughput sequencing
12 samples
2025/04/11
GPL24247
Summary
To study the gene expression profile in the mesendoderm differerntiation of scramble control and Hif-1a knockdown, we performed RNA-seq on the total RNA samples collected from the differentiation of scramble and Hif-1a knockdown AB2.2 mESCs at differentiation day 4. Sramble and Hif-1a knockdown AB2.2 mESCs were built by infecting AB2.2 cells with lentiviruses. Each group contained three biological replicates. The expression matrix was obtained by Hisat2 followed by Stringtie.
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