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Gene expression profile of inflammatory monocytes in cachectic blood cancer mice [bulk RNA-seq]

GSE210001 Mus musculus Expression profiling by high throughput sequencing 6 samples Submitted 2024/07/21 Platform GPL24247
Summary
Many patients with advanced cancers develop cachexia. Despite the high prevalence and catastrophic impact on quality of life and survival, the critical pathobiological mediators responsible for the cancer cachexia development remain poorly defined. Here, we show that a distinct subset of neutrophil-like monocytes, which we term cachexia-inducible monocytes (CiMs), emerges in advanced cancer pathogenesis and promotes skeletal muscle loss. Unbiased transcriptome analysis revealed that IL36G-producing CD38+ CiMs are induced during cachexia progression in the pathogenesis of chronic monocytic blood cancer characterized by persistent monocytosis and cachexia. The emergence of CiMs and activation of CiM-related gene signature in inflammatory monocytes were confirmed in multiple mouse models and patients with advanced solid cancers. Notably, genetic inhibition of IL36G/IL1RL2 signaling attenuated skeletal muscle loss and rescued cachexia phenotypes derived by both blood and solid cancers in mice. These data highlight the critical role for a subset of neutrophil-like monocyte induced in cancer pathogenesis.
Published in
IL36G-producing neutrophil-like monocytes promote cachexia in cancer
Hayashi Y, Kamimura-Aoyagi Y, Nishikawa S et al. · Nature communications 2024 · PMID 39266531 · doi:10.1038/s41467-024-51873-x
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Direct links to NCBI, no account and no request form: the whole study as GSE210001_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA863303 and SRA study SRP388629. Searching any of these in the dataset finder brings you back here.

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