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Low-input unstranded RNA sequencing on bulk tumor or FACS isolated tumor cells from known rhabdomyosarcoma models [Low-input_BulkRNAseq]

GSE231917 Mus musculus Expression profiling by high throughput sequencing 6 samples Submitted 2025/09/22 Platform GPL13112
Summary
Comparision of aP2-Cre, Myog-Cre and Cdh5-Cre SmoM2 driven tumors shows that Cdh5-Cre tumors express muscle markers but have unique gene expression profiles Comparision of aP2-Cre SmoM2/tdTomato tumor cells and Cdh5-Cre SmoM2/tdTomato tumor cells isolated by FACS for CD31-/tdTomato+ cells reveals that Cdh5-Cre tumors are not rhabdomyosarcoma
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Direct links to NCBI, no account and no request form: the whole study as GSE231917_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA970238 and SRA study SRP436443. Searching any of these in the dataset finder brings you back here.

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