Beta cell-specific PAK1 enrichment ameliorates diet-induced glucose intolerance by promoting insulin biogenesis and minimizing beta cell apoptosis [ChIP-Seq]
ChIP-seq / ATAC-seq (genome binding and open chromatin) · human · 2 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Homo sapiens (human)
- Samples
- 2 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Beta cell-specific PAK1 enrichment ameliorates diet-induced glucose intolerance in mice by promoting insulin biogenesis and minimising beta cell apoptosisDiabetologia · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE239306_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA998794 and SRA study SRP451564. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 2 more — browse all 2 samples with per-sample file links →
- GSE239382 Beta cell-specific PAK1 enrichment ameliorates diet-induced glucose intolerance by promoting insulin biogenesis and minimizing beta cell apoptosis 22 samples shares pak1, cell-specific, diet-induced, ameliorates, intolerance, enrichment, biogenesis, minimizing
- GSE239381 Beta cell-specific PAK1 enrichment ameliorates diet-induced glucose intolerance by promoting insulin biogenesis and minimizing beta cell apoptosis [RNA-Seq] 20 samples shares pak1, cell-specific, diet-induced, ameliorates, intolerance, enrichment, biogenesis, minimizing
- GSE51311 Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants (ChIP-seq) 9 samples shares cell-specific
- GSE237957 ZBTB48 is a pioneer factor regulating B-cell-specific CIITA expression [FAIRE-seq] 8 samples shares cell-specific
- GSE237956 ZBTB48 is a pioneer factor regulating B-cell-specific CIITA expression [ChIP-seq] 8 samples shares cell-specific
- GSE342486 Wenshen Xiaozheng Tang ameliorates endometriosis by interrupting the lactate/H3K9la-mediated crosstalk between ectopic endometrial stromal cells and macrophages 5 samples shares ameliorates
- GSE179613 Human epigenetic and transcriptional T cell differentiation atlas for identifying functional T cell-specific enhancers 531 samples shares cell-specific
- GSE282733 Genetic Effects in Response to Exercise and Diet-induced Weight-loss in Human Skeletal Muscle Tissues 108 samples shares diet-induced
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.