Comparing the chromatin accessibility landscapes of WT organoids, RXRi organoids and APCko tumoroids

Direct links to NCBI, no account and no request form: the whole study as GSE239755_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 7 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1000919 and SRA study SRP452509. Searching any of these in the dataset finder brings you back here.

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• GSE342565 Chromatin accessibility profiling of high endothelial cells (HECs) from mouse peripheral lymph node and Peyer's patch by ATAC-seq 2 samples
• GSE304211 H4K16ac contributes to chromatin compartment reorganization during mitotic and meiotic transitions [CUTnTAG] 128 samples
• GSE272524 Chromatin-dependent motif syntax defines differentiation trajectories [ChIP-seq] 76 samples
• GSE294085 SIRT6 Overexpression Counteracts Chromatin Aging [ChIP-Seq] 74 samples
• GSE295340 Polycomb Chromatin Topology Enables Long-Range Enhancer Recruitment during Craniofacial Development [ChIP-seq] 42 samples
• GSE325776 Evolutionary transfer learning enables organism-wide inference of mammalian enhancer landscapes 36 samples

Search all mouse ChIP / ATAC / CUT&Tag datasets in GEO →