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RNA-seq to identify differentially expressed mRNAs after cKO of Ybx1 in DRG [RNA-seq]

GSE255394 Mus musculus Expression profiling by high throughput sequencing 6 samples Submitted 2024/11/15 Platform GPL28457
Summary
To identify the target mRNAs of Ybx1 in mouse DRG, we first performed RNAseq to screen differentially expressed mRNAs after knockout of Ybx1. We generated Wnt1-cre+/-;Ybx1fl/fl cKO mice to specifically knockout Ybx1 in DRG. Then we collected E13.5 DRG from cKO mice and litermate Ybx1fl/fl control mice. After RNA extraction and library construction, RNA sequcencing was performed. Finally, we identified 1638 differentially expressed mRNAs. This study provides a gene list which shows mRNA that can be regulated by Ybx1 in mouse DRG.
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Direct links to NCBI, no account and no request form: the whole study as GSE255394_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1074801 and SRA study SRP489023. Searching any of these in the dataset finder brings you back here.

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