A high-resolution map of active promoters in the human genome
ChIP-seq / ATAC-seq (genome binding and open chromatin) · human · 49 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Homo sapiens (human)
- Samples
- 49 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE2672_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA92111. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 49 more — browse all 49 samples with per-sample file links →
- GSE277183 RNA Polymerase II coordinates histone deacetylation at active promoters 158 samples shares promoters, active
- GSE6273 Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome 64 samples shares promoters
- GSE256481 Germline-like TCR alpha chains shared between autoreactive T cells in blood and pancreas 2424 samples shares active
- GSE313768 Temporal regulation of human reactive astrocytes reveals their capacity for antigen presentation 115 samples shares active
- GSE255400 Germline-like TCR alpha chains shared between autoreactive T cells in blood and pancreas [dataset1] 799 samples shares active
- GSE294036 Human Papillomavirus Genomes Associate with Active Host Chromatin during Viral Genome Maintenance [4C-seq] 7 samples shares active
- GSE264742 Isogenic hiPSC models of Turner syndrome development reveal shared roles of inactive X and Y in the human cranial neural crest network 52 samples shares active
- GSE300696 Identification of reactive CpGs and RNA expression in early COVID-19 through cis-eQTM analysis reflecting disease severity and recovery [RNA-seq] 346 samples shares active
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.