Single-nucleus Multiome ATAC and Gene Expression analysis of the liver tissues from matrin-3 floxed and liver-specific knockout mice

Direct links to NCBI, no account and no request form: the whole study as GSE267585_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1111897 and SRA study SRP508020. Searching any of these in the dataset finder brings you back here.

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• GSE333807 Single-nucleus multiomic profiling of hippocampus and frontal cortex in a C9orf72 knockout mouse model 52 samples
• GSE334540 Single nucleus multiome (RNAseq and ATACseq) of male and female mouse pituitary 32 samples
• GSE293881 Single cell 10X Genomics Multiome Analysis of H3.3K4M Mutant Brain Samples 32 samples
• GSE291235 Effect of myeloid specific Trem2 knockout in hepatocellular carcinoma after anti-PD-1 therapy 30 samples
• GSE327645 BACH1 acts as a pioneer repressor to enable macrophage plasticity and adaptation across tissues and inflammatory contexts [RNA-seq/ATAC-seq] 28 samples
• GSE333887 Matched single-cell chromatin, transcriptome, and surface marker profiling captures in vivo epigenomic reprogramming during basal-to-luminal transition in the mammary gland [transplantations_OneCell_multiome] 14 samples
• GSE190309 Single nuclei RNA and ATAC sequencing of mouse trigeminal ganglia at baseline and in atopic dermatitis-like disease. 14 samples
• GSE217664 Decoding Trp53 regulatory program in various tissues and organs 404 samples

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