Topologically associating domains (TADs) are insufficient for the transcription of β-globin gene and sub-TADs are required for this process

Direct links to NCBI, no account and no request form: the whole study as GSE269934_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1124140 and SRA study SRP514116. Searching any of these in the dataset finder brings you back here.

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• GSE269913 The pioneer transcription factor PBX as a downstream target of MNX1 [ATAC] 10 samples
• GSE331488 A global view of cell-type-specific temporal dynamics in mammalian aging [I] 771 samples
• GSE331489 A global view of cell-type-specific temporal dynamics in mammalian aging [II] 725 samples
• GSE332794 Epigenomic profiling of H3K27ac in mouse brain regions under morphine and LPS exposure 206 samples
• GSE261221 Scaffolding element rewires genome architecture during differentiation at the Zfp608 locus (ChIP-Seq) 189 samples
• GSE311724 Effects of loss of KAT6A on histone acetylation and methylation levels, as well as MLL1 and POLR2A occupancy 134 samples
• GSE304211 H4K16ac contributes to chromatin compartment reorganization during mitotic and meiotic transitions [CUTnTAG] 128 samples
• GSE303384 Mechanism of maintenance and establishment of repression by the Mtg16 tumor suppressor [CUT&RUN, ChIP-Seq] 92 samples

Search all mouse ChIP / ATAC / CUT&Tag datasets in GEO →