GEO series
Myeloid progenitor dysregulation fuels immunosuppressive macrophages in tumours
GSE270148
Mus musculus; Homo sapiens
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
85 samples
2025/07/07
GPL24247GPL24676
Summary
Monocyte-derived macrophages (mo-macs) often drive immunosuppression in the tumour microenvironment (TME) and tumour-enhanced myelopoiesis in the bone marrow fuels these populations. Here we performed paired transcriptome and chromatin accessibility analysis over the continuum of myeloid progenitors, circulating monocytes and tumour-infiltrating mo-macs in mice and in patients with lung cancer to identify myeloid progenitor programs that fuel pro-tumorigenic mo-macs. We show that lung tumours prime accessibility for Nfe2l2 (NRF2) in bone marrow myeloid progenitors as a cytoprotective response to oxidative stress, enhancing myelopoiesis while dampening interferon response and promoting immunosuppression. NRF2 activity is amplified during monocyte differentiation into mo-macs in the TME to regulate stress and drive immunosuppressive phenotype. NRF2 genetic deletion and pharmacological inhibition significantly reduced the survival and immunosuppression of mo-macs in the TME, restoring natural killer and T cell anti-tumour immunity and enhancing checkpoint blockade efficacy. Our findings identify a targetable epigenetic node of myeloid progenitor dysregulation that sustains immunoregulatory mo-macs in the lung TME and highlight the potential of early interventions to reprogram macrophage fate for improved immunotherapy outcomes.
Download
NCBI GEO page ↗
Paper (PMID 40931076) ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
RNA-seq datasets →
Similar datasets
- GSE294573 HNF4a controls growth, identity and response to KRAS inhibition in IMA. 60 samples
- GSE296761 Elucidating the impact of chemotherapy on skeletal progenitors 43 samples
- GSE300464 TET3 Promotes Tumor Immune Evasion Through Negative Regulation of Type I Interferon Signaling 28 samples
- GSE288137 Single cell multiomics unravel the transcription networks controlling the different EMT tumor states 16 samples
- GSE266956 Increased translation driven by a non-canonical EZH2 cistrome creates a synthetic vulnerability in enzalutamide-resistant prostate cancer 42 samples
- GSE198157 Direct Inhibition of Tumor Hypoxia Response with Synthetic Transcriptional Repressors 31 samples
- GSE293308 Regulation of endothelial cell chromatin availability and transcription factor activity in arterial-venous specification 18 samples
- GSE287896 G-quadruplex DNA suppresses transcription during DNA replication 80 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.