Bidirectional histone monoaminylation dynamics regulate neural rhythmicity
RNA-seq (gene expression) · mouse · 111 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 111 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Bidirectional histone monoaminylation dynamics regulate neural rhythmicityNature · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE270429_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1126624 and SRA study SRP515226. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 111 more — browse all 111 samples with per-sample file links →
- GSE271982 Histone acetylation-dependent clustering of BRD2 instructs transcription dynamics 168 samples shares dynamics, histone
- GSE312233 Stag2-mediated chromatin dynamics regulates antibody class switch recombination 60 samples shares dynamics, regulate
- GSE234065 Unexpected nuclear hormone receptor and chromatin dynamics regulate estrous cycle dependent gene expression 32 samples shares dynamics, regulate
- GSE325227 CD69 regulates the tissue dynamics of epigenetically imprinted memory CD4+ T cells [RNA-seq_ATAC-seq] 22 samples shares dynamics, regulate
- GSE285581 Posttranscriptional Control of Neural Progenitors Temporal Dynamics During Neocortical Development by Syncrip 11 samples shares dynamics, neural
- GSE248194 Characterizing dynamics and lineage of bihormonal cell in mammalian pancreatic islets [Smart-seq3xpress] 1430 samples shares dynamics
- GSE84371 Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons 924 samples shares dynamics
- GSE284137 Tissue and cellular spatiotemporal dynamics in colon aging 395 samples shares dynamics
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.