Transcriptomic analysis of RNA psi modification in colorectal cancer reveals an epitranscriptomic regulation in cellular senescence

Direct links to NCBI, no account and no request form: the whole study as GSE271639_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1132673 and SRA study SRP518335. Searching any of these in the dataset finder brings you back here.

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• GSE294300 Single-cell gene expression profiles of cells from primary colorectal cancer and adjacent normal tissue [scRNA-Seq] 36 samples
• GSE316922 Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer 36 samples
• GSE337246 Integrated single-cell profiling of RNA and DNA interactomes reveals targetable chromatin architectures in cancer [scRNA-Seq organoids] 35 samples
• GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
• GSE303346 Single-Cell RNA-Seq Reveals Immunosuppressive Effects of Triple-Negative Breast Cancer–Derived Exosomes on NK Cell Responses 16 samples

Search all human RNA-seq datasets in GEO →