Targeting nucleoporin 214 selectively eliminates leukemia stem cells by inducing ferroptosis
ChIP-seq / ATAC-seq (genome binding and open chromatin) · mouse · 68 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Mus musculus (mouse)
- Samples
- 68 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE273655_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA1142570 and SRA study SRP523398. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 68 more — browse all 68 samples with per-sample file links →
- GSE273647 Targeting nucleoporin 214 selectively eliminates leukemia stem cells by inducing ferroptosis [RNA-seq 3] 10 samples shares nucleoporin, selectively, ferroptosis, eliminates, targeting, leukemia, inducing, stem
- GSE273648 Targeting nucleoporin 214 selectively eliminates leukemia stem cells by inducing ferroptosis [RNA-seq 4] 10 samples shares nucleoporin, selectively, ferroptosis, eliminates, targeting, leukemia, inducing, stem
- GSE273642 Targeting nucleoporin 214 selectively eliminates leukemia stem cells by inducing ferroptosis [RNA-seq 1} 10 samples shares nucleoporin, selectively, ferroptosis, eliminates, targeting, leukemia, inducing, stem
- GSE302497 Targeting nucleoporin 214 selectively eliminates leukemia stem cells by inducing ferroptosis [H3K27ac CUT-Tag-seq] 4 samples shares nucleoporin, selectively, ferroptosis, eliminates, targeting, leukemia, inducing, stem
- GSE325782 Ketogenesis promotes leukemia development by inhibiting ferroptosis in leukemic stem cells [RNA-Seq] 9 samples shares ferroptosis, leukemia, stem
- GSE330183 SLC7A11 deficiency exacerbates systemic lupus erythematosus by inducing instability and ferroptosis in regulatory T cells 9 samples shares ferroptosis, inducing, stem
- GSE278372 Identification of lipid senolytics targeting senescent cells through ferroptosis induction 45 samples shares ferroptosis, targeting
- GSE73357 Heterogeneous ribosomes exist and selectively translate distinct subpools of mRNAs in stem cells 20 samples shares selectively, stem
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.