Multiomic ATAC + Gene Expression sequencing on E8.75 wild type and Nr6a1 null mouse embryos

Direct links to NCBI, no account and no request form: the whole study as GSE287235_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1211666 and SRA study SRP557899. Searching any of these in the dataset finder brings you back here.

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+ 4 more — browse all 4 samples with per-sample file links →

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• GSE254090 A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders 87 samples
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• GSE294332 Multiomic single nuclei profiling of a mouse model of Alzheimer’s disease reveals that ACSS2 confers neuronal resilience to tauopathy 49 samples
• GSE292377 Step-wise signal integration governs adaptive programming of lymphocytes [bulkRNA-seq and ATAC-seq] 41 samples
• GSE222656 RNA-seq and Cut & Tag analyses of mouse 2-cell embryos in which lamin B1 dissociation from the nuclear envelope is inhibited 40 samples
• GSE327645 BACH1 acts as a pioneer repressor to enable macrophage plasticity and adaptation across tissues and inflammatory contexts [RNA-seq/ATAC-seq] 28 samples
• GSE190309 Single nuclei RNA and ATAC sequencing of mouse trigeminal ganglia at baseline and in atopic dermatitis-like disease. 14 samples

Search all mouse RNA-seq datasets in GEO →