← BioTransfer GEO Dataset Finder
GEO series

Autophagy Impairment in Retinal Ganglion Cells Following Hypoglycemia in Mice.

GSE292784 Mus musculus Expression profiling by high throughput sequencing 6 samples Submitted 2025/11/27 Platform GPL21103
Summary
Diabetic retinopathy (DR), caused by hypo- and hyperglycemia, is a leading cause of blindness. Hypoglycemia induces endoplasmic reticulum stress and retinal cell death in mice, and low glucose conditions induce macroautophagy/autophagy defects in 661W photoreceptor cells and retinal explants. To further understand the effect of hypoglycemia on the mouse retina, we studied autophagy in vivo. Retinal explants cultured under low glucose conditions exhibited autophagy activation; a similar pattern was observed in the presence of autophagy modulators. Intraocular injection of rapamycin and 5 h hypoglycemia had similar effects, specifically in the ganglion cell layer, as shown by green fluorescence protein (GFP) colocalization with different ganglion cell markers. We then isolated retinal ganglion cells (RGCs) from two mouse lines and cultured them at different glucose concentrations. We also assessed autophagosome/lysosome fusion in C57BL/6 RGCs infected with the RFP-GFP-LC3 lentivirus and cultured under different conditions. p62 protein expression and GFP fluorescence increased when RGCs were cultured with 1 or 25 mM glucose in the presence of rapamycin, whereas no sign of autophagy was detected with 5 or 25 mM glucose alone. The fusion process was defective at 1 and 25 mM glucose in the presence of chloroquine, but normal with 5 and 25 mM glucose alone. This study showed that 5 h hypoglycemia induces autophagosome formation in mouse RGCs; however, a defect in the fusion process inhibits the protective effect of autophagy. Therefore, the modulation of both autophagic and apoptotic pathways might be important to avoid complications associated with DR.
Published in
Autophagy Impairment in Retinal Ganglion Cells Following Hypoglycemia in Mice
Fresia D, Cannizzaro E, Borgo A et al. · Cells 2025 · PMID 41294828 · doi:10.3390/cells14221774
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE292784_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1241248 and SRA study SRP572678. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 6 more — browse all 6 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.