← BioTransfer GEO Dataset Finder
GEO series

Sustained αβ T Cell Effector Activity and Memory Expansion in Children with Congenital Heart Disease

GSE299265 Homo sapiens Expression profiling by high throughput sequencing; Other 3 samples Submitted 2026/05/20 Platform GPL34281
Summary
Congenital heart disease (CHD) is a major global health problem. Although treatment has improved, children still face comorbidities that may shorten their life. Most studies of the immune system in people with CHD have focused on the quantitative analysis of lymphocyte subpopulations, maturation and T cell receptor repertoires, while knowledge of effector functions is limited. We analysed αβ T cell phenotypes, transcriptomes and functions in children with CHD who underwent cardiac surgery within a year of birth and were followed up five to ten years after thymectomy, in comparison to age-matched healthy controls. We show that children with CHD have immunological alterations, including reduced T cell populations, lower CD4+ or CD8+ T cell proportions, reduced proportions of recent thymic emigrants (RTEs) and naive cells, and an accumulation of memory T cell populations. Single-cell transcriptomics and functional assays revealed high activation states of T cells and higher granzyme and effector cytokine production in children with CHD. Our study provides a foundation for longitudinal studies in children, adults and the elderly to unravel the cause of increased morbidity and mortality in these patients.
Published in
Sustained Effector Functions and Memory Accumulation of αβ T Cells in Children With Congenital Heart Disease
Abu YE, Kammeyer C, Yang T et al. · European journal of immunology 2026 · PMID 42125986 · doi:10.1002/eji.70209
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE299265_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 3 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1273188 and SRA study SRP590484. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 3 more — browse all 3 samples with per-sample file links →

Similar datasets

Search all human RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.