Hybrid Endometrial-Derived Hydrogel and Human Endometrial Organoids Synergize for Uterine Regeneration in an Immunocompetent Murine Model
RNA-seq (gene expression) · mouse · 23 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 23 samples: 6 × SHAM_S vs 6 × HG_S vs 6 × HG+ORG_S vs 5 × PBS_SGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Hybrid endometrial-derived hydrogel and human endometrial organoids synergize for uterine regeneration in an immunocompetent murine modelStem cell research & therapy · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE304635_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1301962 and SRA study SRP606705. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 23 samples.
How we read this: 4 replicated groups read from 23 sample titles; they account for 23 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9154428 SHAM_S1 SHAM_S
- GSM9154429 SHAM_S2 SHAM_S
- GSM9154430 SHAM_S3 SHAM_S
- GSM9154431 SHAM_S4 SHAM_S
- GSM9154432 SHAM_S5 SHAM_S
- GSM9154433 SHAM_S6 SHAM_S
- GSM9154434 PBS_S7 PBS_S
- GSM9154435 PBS_S8 PBS_S
- GSM9154436 PBS_S9 PBS_S
- GSM9154437 PBS_S10 PBS_S
- GSM9154438 PBS_S11 PBS_S
- GSM9154439 HG_S12 HG_S
- GSM9154440 HG_S13 HG_S
- GSM9154441 HG_S14 HG_S
- GSM9154442 HG_S15 HG_S
- GSM9154443 HG_S16 HG_S
- GSM9154444 HG_S17 HG_S
- GSM9154445 HG+ORG_S18 HG+ORG_S
- GSM9154446 HG+ORG_S19 HG+ORG_S
- GSM9154447 HG+ORG_S20 HG+ORG_S
- GSM9154448 HG+ORG_S21 HG+ORG_S
- GSM9154449 HG+ORG_S22 HG+ORG_S
- GSM9154450 HG+ORG_S23 HG+ORG_S
- GSE269634 Triggering AHR resolves TGF-β1 induced fibroblast activation and promotes AT1 cell regeneration in alveolar organoids 32 samples shares regeneration, organoids
- GSE227517 Endometrial Cancer Susceptibility Gene CTCF is Essential for Progesterone Dependent Uterine Maturation 24 samples shares endometrial, uterine
- GSE267890 Tracing immunological interaction in trimethylamine N-oxide hydrogel-derived zwitterionic microenvironment during promoted diabetic wound regeneration 12 samples shares regeneration, hydrogel
- GSE267938 Functional optic tract rewiring via subtype- and target-specific axonal regeneration and presynaptic activity enhancement 256 samples shares regeneration
- GSE268045 StealTHY: enabling CRISPR-Cas9 screens in immunocompetent hosts to expose concealed metastatic regulators [paired-end] 70 samples shares immunocompetent
- GSE276182 NF-κB activation in astrocytes critically affects wound regeneration after traumatic brain injury 51 samples shares regeneration
- GSE226579 Stem Cell Activity-Coupled Suppression of Endogenous Retrovirus Governs Adult Tissue Regeneration [RNA-seq] 47 samples shares regeneration
- GSE268044 StealTHY: enabling CRISPR-Cas9 screens in immunocompetent hosts to expose concealed metastatic regulators [single-end] 45 samples shares immunocompetent
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.