Wnt-materials sustain H3K14-acetylation in human skeletal stem cells for tissue engineering and bone repair [CUT&Tag]
ChIP-seq / ATAC-seq (genome binding and open chromatin) · human · 12 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Homo sapiens (human)
- Samples
- 12 samples: 12 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Wnt-presenting materials sustain H3K14-acetylation in human skeletal stem cells for tissue engineering and bone repairNPJ Regenerative medicine · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE310734_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA1367006 and SRA study SRP647246. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 12 sample titles: 12 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9307741 K14_A1_L1
- GSM9307742 K14_A2_L1
- GSM9307743 K14_A3_L1
- GSM9307744 K14_I1_L1
- GSM9307745 K14_I2_L1
- GSM9307746 K14_I3_L1
- GSM9307747 K27_A1_L1
- GSM9307748 K27_A2_L1
- GSM9307749 K27_A3_L1
- GSM9307750 K27_I1_L1
- GSM9307751 K27_I2_L1
- GSM9307752 K27_I3_L1
- GSE310737 Wnt-materials sustain H3K14-acetylation in human skeletal stem cells for tissue engineering and bone repair 26 samples shares h3k14-acetylation, wnt-materials, engineering, skeletal, sustain, repair, stem
- GSE303343 A unified network systems approach uncovers a core program underlying T follicular helper cell differentiation [CUT&RUN] 48 samples shares cut, stem
- GSE318107 CAD-C: An engineered nuclease enables repair-free in situ proximity ligation and nucleosome-resolution chromosome walks in human cells [Cut & Tag] 10 samples shares cut, repair
- GSE239775 Quantification of Systemic Inflammation by a Gene Score Uncovers Relevant Features on Acutely Decompensated Cirrhosis 1177 samples shares cut, stem
- GSE130955 Global skin gene expression profile of early diffuse cutaneous systemic sclerosis shows a prominent innate and adaptive immunity profile 91 samples shares cut, stem
- GSE300793 Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [RNAseq] 57 samples shares cut, stem
- GSE241581 DCAF15 control of cohesin dynamics sustains acute myeloid leukemia 36 samples shares cut, sustain
- GSE295359 Mega-scale single-cell profiling reveals novel biomarkers associated with acute GvHD after allogeneic hematopoietic stem cell transplantation 15 samples shares cut, stem
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.