← BioTransfer GEO Dataset Finder
GEO series

Ly6C+Sca-1+ virtual memory CD8+ T cells responding to IL-15/Rα complex promote chronic liver inflammation

GSE316113 Mus musculus Expression profiling by high throughput sequencing 4 samples Submitted 2026/02/01 Platform GPL17021
Summary
Virtual memory (VM) CD8+ T cells are cytokine-driven, memory-phenotype lymphocytes maintained independently of antigen exposure. However, their role in chronic hepatic inflammation remains poorly defined. Here, we examined whether signaling through the IL-15/Rα complex (IL-15C) modulates VM CD8+ T cell responses during chronic liver injury. Mice were pretreated with IL-15C prior to induction of chronic liver injury using thioacetamide (TAA). VM CD8+ phenotypes, transcriptional profiles, and hepatic accumulation were analyzed by flow cytometry and mRNA sequencing. Type I interferon-deficient and CD8-depleted mouse model were used to assess the contribution of cytokine signaling and CD8+ T cells to the observed responses. IL-15C induced robust expansion of VM CD8+ T cells in both the spleen and liver, with preferential enrichment of a Ly6C+Sca-1+ subsets. IL-15C reprogrammed VM CD8+ T cells toward an effector and migratory phenotype, characterized by increased expression of EOMES, T-bet, NKG2D, and inflammatory chemokine receptors, along with reduced tissue-residency signatures. During chronic TAA-induced liver inflammation, VM CD8+ T cells, particularly the Ly6C+Sca-1+ subsets, accumulated in the liver, and IL-15C pretreatment further enhanced hepatic immune cell infiltration and was associated with sustained liver injury and fibrotic responses. Notably, IL-15-induced VM T cells exhibited reduced PD-1 expression and sustained NKG2D expression, especially within CD62L+ and CD69+ VM T cell populations. These findings demonstrate that IL-15C drives the expansion and phenotypic reprogramming of VM CD8+ T cells toward an effector-like, migratory state and is associated with enhanced hepatic immune cell infiltration during chronic liver injury.
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE316113_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1400630 and SRA study SRP661138. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 4 more — browse all 4 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.