← BioTransfer GEO Dataset Finder
GEO series

Lamins gate nuclear and chromatin structures for cardiomyocyte maturation genes. (P0.5 scRNA-seq)

GSE330100 Mus musculus Expression profiling by high throughput sequencing 3 samples Submitted 2026/08/05 Platform GPL19057
Summary
The nuclear lamina contains intermediate filaments, called lamins, which function to maintain nuclear integrity and organize the Lamina-Associated chromatin Domains (LADs). Despite near ubiquitous expression, lamins show cell-type-specific functions. In the heart, they support epicardial cell migration, cardiomyocyte nuclear integrity and maturation. How these functions are integrated with different gene expression programs in these cells during heart development is unknown. We show that cardiomyocytes require lamin-A and -B1 for perinatal mouse survival. Importantly, lamin-B1 facilitates timely cardiomyocyte maturation by maintaining LADs and chromosome territories. By examining changes in cardiomyocyte gene expression and 3D genome organization upon lamin-B1 deletion, we show lamin-B1 maintains chromatin neighborhoods, which can in turn support transcription factors that regulate genes involved in cardiomyocyte structural maturation and gradual cessation of cell division. We propose a genomic logic by which the widely expressed lamins collaborate with transcription factors to specifically promote cardiomyocyte maturation and cell cycle exit during development.
Published in
Lamins gate nuclear and chromatin structures for cardiomyocyte maturation genes
Bossone KA, Zheng X, Kristiani L et al. · bioRxiv : the preprint server for biology 2026 · PMID 42239077 · doi:10.64898/2026.05.20.726565
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE330100_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 3 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1462739 and SRA study SRP698027. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 3 more — browse all 3 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.