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Single Nuclei sequencing of mouse model of MBL1 and 2 KD in a Pax7-DTA model

GSE335902 Mus musculus Expression profiling by high throughput sequencing 4 samples Submitted 2026/07/15 Platform GPL24247
Summary
Myotonic dystrophy type 1 (DM1) is a multisystemic disorder caused by expanded CTG repeats in DMPK transcripts and consequent loss of MBNL protein function. Skeletal muscle in DM1 displays abundant centrally located nuclei despite limited immune-cell–associated fibre necrosis, complicating interpretation of the underlying mechanisms of muscle damage and remodelling. Here, we combine single-nucleus RNA sequencing of human DM1 muscle biopsies with adult-onset, myofibre-specific Mbnl knockdown mouse models to investigate muscle stem cell (MuSC) behaviour in this context. We identify increased numbers of activated MuSCs and a distinct population of myonuclei exhibiting a transitional transcriptional state, including expression of MuSC-associated markers and elevated DMPK levels. In mice, myofibre-restricted MBNL knockdown induces myonuclear accretion in the absence of overt necrosis and promotes analogous transcriptionally distinct myonuclear states. MuSC lineage tracing and ablation demonstrate that MuSC fusion contributes to central nucleation. Together, these findings indicate that MuSC-mediated fusion drives myonuclear remodelling in DM1 muscle, giving rise to centrally located myonuclei with altered transcriptional states. Notably, MuSC ablation did not significantly alter key functional parameters, including myotonia and muscle force, indicating that MuSC-mediated fusion is not a major determinant of overt muscle dysfunction in this model.
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Direct links to NCBI, no account and no request form: the whole study as GSE335902_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1479794 and SRA study SRP710731. Searching any of these in the dataset finder brings you back here.

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