Genome-scale methylome profiling of pheochromocytomas and paragangliomas with Illumina Infinium 27k Human Methylation arrays
DNA methylation · human · 148 samples
- What it is
- DNA methylationChemical marks on DNA that help switch genes on or off.
- Organism
- Homo sapiens (human)
- Samples
- 148 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE39198_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: Look for beta-value tables or raw IDAT files among the supplementary files.
Also filed as BioProject PRJNA170889. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 148 more — browse all 148 samples with per-sample file links →
- GSE29505 Custom Illumina array DNA methylation analysis of 384 CpGs across five cancer types 290 samples shares methylation, illumina
- GSE65820 Whole genome characterisation of chemoresistant ovarian cancer [Illumina_450K_Methylation] 121 samples shares methylation, illumina
- GSE67751 Blood Illumina Inf 450 DNA methylation samples from HIV+ and HIV- human subjects 92 samples shares methylation, illumina
- GSE67749 Frontal lobe (brain) Illumina Inf 450 DNA methylation samples from HIV+ and HIV- human subjects 33 samples shares methylation, illumina
- GSE282574 Genome-scale DNA methylome and transcriptome profiles of early prostate cancer recurrence after prostatectomy 29 samples shares genome-scale, methylome
- GSE67748 Cerebellum Illumina Inf 450 DNA methylation samples from HIV+ and HIV- human subjects 20 samples shares methylation, illumina
- GSE278135 Genome-scale DNA methylome and transcriptome profiles of early prostate cancer recurrence after prostatectomy [RNA-seq] 18 samples shares genome-scale, methylome
- GSE86831 Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling [MethylationEPIC] 15 samples shares methylation, illumina
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.