GEO series

Cerebellum Illumina Inf 450 DNA methylation samples from HIV+ and HIV- human subjects

GSE67748 Homo sapiens Methylation profiling by genome tiling array 20 samples Submitted 2015/06/09 Platform GPL13534

Summary

Genome wide DNA methylation profiles of cerebellum from HIV positive and HIV negative human subjects. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 486,000 CpGs. Dataset included 20 subjects from the USA. The epigenetic clock software (Horvath 2013) was used to measure epigenetic age acceleration effects and to relate them to HIV status.

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Direct links to NCBI, no account and no request form: the whole study as GSE67748_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 20 samples.

Whole study · RAW.tar ↓ Series matrix ↓ All supplementary files ↗

Also filed as BioProject PRJNA280836. Searching any of these in the dataset finder brings you back here.

NCBI GEO page ↗ Paper (PMID 25969563) ↗

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