Expression data from YAP-S127D DLD1 Xenografts
Expression microarray · human · 6 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 6 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE41508_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA177340. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 6 more — browse all 6 samples with per-sample file links →
- GSE276272 effect of PPA2 knockdown on gene expression under normoxia or hypoxia of DLD1 colerectal cancer cells 8 samples shares dld1
- GSE301561 Effect of treating DLD1 organoids with either single agent MEK (cobimetinib) inhibition or APC restoration on chromatin accessibility. 10 samples shares dld1
- GSE290123 Comprehensive Transcriptomic Analysis of DLD1 Colon Cancer Cells Overexpressing TRMT6 and TRMT61A Genes [RNA-seq] 8 samples shares dld1
- GSE291181 Transcriptome of 3D cultivated colon cancer cell lines (HCT116, SW620, DLD1) and HCEC-1CT 4 samples shares dld1
- GSE98399 Acute and chronic treatment of trametinib plus lapatinib in patient-derived xenografts (PDX) of pancreatic adenocarcinoma (PDAC) 43 samples shares xenografts
- GSE246920 Differential gene expression induced by combined docetaxel and darolutamide in prostate cancer xenografts 63 samples shares xenografts
- GSE193388 Expression profiling of HPV+ Patient Derived Xenografts (PDXs) by high throughput sequencing 21 samples shares xenografts
- GSE294454 Effect of KO-2806 and cabozantinib treatment on gene expression in KI-12-0073 clear cell renal cell carcinoma (ccRCC) xenografts 20 samples shares xenografts
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.