Genome-scale methylome profiling of pheochromocytomas and paragangliomas with Illumina HumanMethylation450 arrays
DNA methylation · human · 24 samples
- What it is
- DNA methylationChemical marks on DNA that help switch genes on or off.
- Organism
- Homo sapiens (human)
- Samples
- 24 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE43293_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: Look for beta-value tables or raw IDAT files among the supplementary files.
Also filed as BioProject PRJNA185311. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 24 more — browse all 24 samples with per-sample file links →
- GSE39198 Genome-scale methylome profiling of pheochromocytomas and paragangliomas with Illumina Infinium 27k Human Methylation arrays 148 samples shares pheochromocytomas, paragangliomas, genome-scale, methylome, illumina, arrays
- GSE42409 Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array 12 samples shares humanmethylation450, illumina
- GSE49277 Genome-scale methylome profiling of adrenocortical carcinomas (ACC) and adenomas (ACA) 81 samples shares genome-scale, methylome
- GSE282574 Genome-scale DNA methylome and transcriptome profiles of early prostate cancer recurrence after prostatectomy 29 samples shares genome-scale, methylome
- GSE278135 Genome-scale DNA methylome and transcriptome profiles of early prostate cancer recurrence after prostatectomy [RNA-seq] 18 samples shares genome-scale, methylome
- GSE32866 Genome-scale DNA methylation profiling of lung adenocarcinoma: validation using Ontario Tumor Bank samples 55 samples shares genome-scale
- GSE25062 Genome-scale analysis of aberrant DNA methylation in colorectal cancer 154 samples shares genome-scale
- GSE314342 Genome-scale perturb-seq in primary human CD4+ T cells reveals genes regulating T cell programs and human immune traits. 577 samples shares genome-scale
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.