Expression data from EZH2 inhibitor treated Non-Hodgkins Lymphoma cell lines
Expression microarray · human · 108 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 108 samples: 108 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE49284_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA213485. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 108 sample titles: 108 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM1196663 WSU_DMSO_Day2_A
- GSM1196664 WSU_DMSO_Day2_B
- GSM1196665 WSU_DMSO_Day2_C
- GSM1196666 WSU_LOW_Day2_A
- GSM1196667 WSU_LOW_Day2_B
- GSM1196668 WSU_LOW_Day2_C
- GSM1196669 WSU_HIGH_Day2_A
- GSM1196670 WSU_HIGH_Day2_B
- GSM1196671 WSU_HIGH_Day2_C
- GSM1196672 PFEIFFER_DMSO_Day2_A
- GSM1196673 PFEIFFER_DMSO_Day2_B
- GSM1196674 PFEIFFER_DMSO_Day2_C
- GSM1196675 PFEIFFER_LOW_Day2_A
- GSM1196676 PFEIFFER_LOW_Day2_B
- GSM1196677 PFEIFFER_LOW_Day2_C
- GSM1196678 PFEIFFER_HIGH_Day2_A
- GSM1196679 PFEIFFER_HIGH_Day2_B
- GSM1196680 PFEIFFER_HIGH_Day2_C
- GSM1196681 SUDHL6_DMSO_Day2_A
- GSM1196682 SUDHL6_DMSO_Day2_B
- GSM1196683 SUDHL6_DMSO_Day2_C
- GSM1196684 SUDHL6_LOW_Day2_A
- GSM1196685 SUDHL6_LOW_Day2_B
- GSM1196686 SUDHL6_LOW_Day2_C
- GSM1196687 SUDHL6_HIGH_Day2_A
- GSM1196688 SUDHL6_HIGH_Day2_B
- GSM1196689 SUDHL6_HIGH_Day2_C
- GSM1196690 KARPAS_DMSO_Day2_A
- GSM1196691 KARPAS_DMSO_Day2_B
- GSM1196692 KARPAS_DMSO_Day2_C
- GSM1196693 KARPAS_LOW_Day2_A
- GSM1196694 KARPAS_LOW_Day2_B
- GSM1196695 KARPAS_LOW_Day2_C
- GSM1196696 KARPAS_HIGH_Day2_A
- GSM1196697 KARPAS_HIGH_Day2_B
- GSM1196698 KARPAS_HIGH_Day2_C
- GSM1196699 WSU_DMSO_Day4_A
- GSM1196700 WSU_DMSO_Day4_B
- GSM1196701 WSU_DMSO_Day4_C
- GSM1196702 WSU_LOW_Day4_A
+ 68 more — browse all 108 samples with per-sample file links →
- GSE293546 EZH2 inhibitor SHR2554 enhances the anti-tumor efficacy of HDAC inhibitor Chidamide through STAT1 in T-cell lymphoma 34 samples shares ezh2, inhibitor, lymphoma
- GSE283388 Gene Expression Profiling in Diffuse Large B-Cell Lymphoma (DLBCL) Cell Lines Treated with Selinexor 12 samples shares lymphoma, treated, lines
- GSE314603 Transcriptomic profiling of MCL-1 inhibitor response and resistance in mantle cell lymphoma cell lines and patient PBMCs 20 samples shares inhibitor, lymphoma, lines
- GSE270684 The EZH2 and EZH1 inhibitor valemetostat derepresses p16INK4a to induce early endomitotic exit in megakaryocytes [scATAC-Seq] 66 samples shares ezh2, inhibitor
- GSE212476 Skin expression data from psoriasis patients treated with IL-17A inhibitor 40 samples shares inhibitor, treated
- GSE222196 Treatment of prostate cancer cell lines with Androgen Receptor and Receptor Tyrosine Kinase inhibitors 246 samples shares inhibitor, lines
- GSE296117 A single-cell RNA-seq dataset of synovial fluid from rheumatoid arthritis treated with TNF-α/JAK inhibitor 18 samples shares inhibitor, treated
- GSE275078 In vitro drug screening of RAF/MEK/ERK Inhibitors in combination with Autophagy inhibition in the context of two PDA Cell Lines 136 samples shares inhibitor, lines
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.