MG447 profile of lumbar spinal cord homogenate from healthy controls and ALS
human · 16 samples
- Organism
- Homo sapiens (human)
- Samples
- 16 samples: 6 × sALS 701 vs 4 × HC A13 vs 3 × HC A12 vs 2 × fALS 701Groups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE52959_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
Also filed as BioProject PRJNA230551. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 15 samples.
How we read this: 4 replicated groups read from 16 sample titles; they account for 15 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM1278615 HC A13-14 HC A13
- GSM1278616 HC A13-17 HC A13
- GSM1278617 HC A13-18 HC A13
- GSM1278618 HC A12-5-112
- GSM1278619 HC A12-241 HC A12
- GSM1278620 HC A12-243 HC A12
- GSM1278621 HC A13-7 HC A13
- GSM1278622 HC A12-200 HC A12
- GSM1278623 sALS 701-001 sALS 701
- GSM1278624 sALS 701-004 sALS 701
- GSM1278625 sALS 701-002 sALS 701
- GSM1278626 sALS 701-005 sALS 701
- GSM1278627 sALS 701-007 sALS 701
- GSM1278628 sALS 701-015 sALS 701
- GSM1278629 fALS 701-013 fALS 701
- GSM1278630 fALS 701-006 fALS 701
- GSE330130 A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS [snRNA-Seq; snATAC-Seq] 87 samples shares als, lumbar, spinal, cord
- GSE287257 Spinal cord single-nuclei RNA sequencing of human ALS spinal cords [ALS human snRNAseq] 12 samples shares als, spinal, cord
- GSE233321 Single-cell map of the healthy human immune system across the lifespan reveals unique infant immune signatures 118 samples shares als, healthy
- GSE98793 Gene expression analysis in whole blood samples obtained from donors diagnosed with MDD compared to healthy controls 192 samples shares controls, healthy
- GSE327386 RNA-Seq of paired diagnosis and relapse AML specimens with healthy controls 130 samples shares controls, healthy
- GSE196350 RNAseq analysis of blood from influenza infected patients and healthy controls 69 samples shares controls, healthy
- GSE161245 Comparison of bronchial epithelial cells obtained by bronchoscopy from mild asthma patients, moderate asthma patients, severe asthma patients and healthy controls 55 samples shares controls, healthy
- GSE289044 Spatial proteo-transcriptomic profiling reveals the molecular landscape of borderline ovarian tumors and their invasive progression 252 samples shares als
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.