Transcriptomics analysis of gene expression in 10 embryo development stages of Danio rerio

Direct links to NCBI, no account and no request form: the whole study as GSE65556_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 10 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA274362 and SRA study SRP053099. Searching any of these in the dataset finder brings you back here.

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+ 10 more — browse all 10 samples with per-sample file links →

• GSE60619 Danio rerio high resolution developmental transcriptomic time-course 106 samples
• GSE120643 Transcriptomics analysis of gene expression in wide type, ybx1 MO, pabpc1a MO zebrafish embryo sample. 28 samples
• GSE112294 Systematic mapping of cell state trajectories, cell lineage, and perturbations in the zebrafish embryo using single cell transcriptomics 18 samples
• GSE147112 Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition 114 samples
• GSE84601 RNA-seq analysis comparing WT, Rad21 MO and CTCF MO zebrafish embryos at stages (2.5, 3.3, 4.5, 5.3, 10 hpf) pre and post ZGA (zygotic genome activation) 45 samples
• GSE148391 Early zebrafish development time course transcriptome 30 samples
• GSE202639 Embryo-scale reverse genetics at single-cell resolution 8 samples
• GSE30603 [E-MTAB-434] Transcription profiling by high throughput sequencing of zebra fish tissues and developmental stages 7 samples

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