[E-MTAB-434] Transcription profiling by high throughput sequencing of zebra fish tissues and developmental stages

Direct links to NCBI, no account and no request form: the whole study as GSE30603_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 7 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA144551 and SRA study ERP000400. Searching any of these in the dataset finder brings you back here.

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+ 7 more — browse all 7 samples with per-sample file links →

• GSE106587 Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis 446 samples
• GSE60619 Danio rerio high resolution developmental transcriptomic time-course 106 samples
• GSE84601 RNA-seq analysis comparing WT, Rad21 MO and CTCF MO zebrafish embryos at stages (2.5, 3.3, 4.5, 5.3, 10 hpf) pre and post ZGA (zygotic genome activation) 45 samples
• GSE65556 Transcriptomics analysis of gene expression in 10 embryo development stages of Danio rerio 10 samples
• GSE73811 Transcriptional Profiling of Zebrafish Embryonic Developmental Time Course 9 samples
• GSE46512 Ribosome Profiling over a Zebrafish Developmental Timecourse 8 samples
• GSE106466 Single-cell RNAseq (SMART-seq2) of wild-type (TLAB) and MZoep (tz57) zebrafish embryos at 50% epiboly stage 416 samples
• GSE162415 Temporal transcriptome in Pou5f3, Nanog and Sox19b mutant zebrafish embryos 232 samples

Search all RNA-seq datasets in GEO →