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Gene expression profiling of cell subpopulations from different regions of the mouse brain

GSE72826 Mus musculus Expression profiling by high throughput sequencing 36 samples Submitted 2017/01/16 Platform GPL9185
Summary
As a starting point for dissecting the cellular heterogeneity of astrocytes in the adult brain, we focused our initial studies on the olfactory bulb (OB) and combined an Aldh1l1-GFP reporter mouse with candidate cell surface markers to isolate astrocyte sub-populations using FACS analysis. To this end, we screened a panel of cell surface antigens for their ability to divide the Aldh1l1-GFP astrocyte population within the OB into distinct sub-populations. Candidate cell surface markers were selected based on previously published gene expression profiling data from our lab and others and antibody availability. Different subpopulations from different brain regions were profiled for gene expression.
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Direct links to NCBI, no account and no request form: the whole study as GSE72826_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 36 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA295171 and SRA study SRP063505. Searching any of these in the dataset finder brings you back here.

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