TT-Seq captures the human transient transcriptome

Direct links to NCBI, no account and no request form: the whole study as GSE75792_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 12 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA305363 and SRA study SRP067119. Searching any of these in the dataset finder brings you back here.

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+ 12 more — browse all 12 samples with per-sample file links →

• GSE315586 Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis 414 samples
• GSE291147 Mapping convergent regulators of melanoma drug resistance by PerturbFate 320 samples
• GSE270506 Epigenetic heterogeneity and state-specific transcriptional programs determine differential drug response in osteosarcoma. 279 samples
• GSE199913 KDM4C inhibition blocks tumor growth in basal breast cancer by promoting cathepsin L-mediated histone H3 cleavage 231 samples
• GSE146585 Functional genomics assays, including ChIP-seq, ATAC-seq, RNA-seq, GRO-seq, and in situ Hi-C, in the context of replicative senescence 223 samples
• GSE300177 Catalytic inhibition of KAT6/KAT7 enhances the efficacy and overcomes primary and acquired resistance to Menin inhibitors in MLL leukaemia 194 samples
• GSE281526 Single-nuclei RNA-seq and ATAC-seq for Human Retina from Diverse Ancestry Backgrounds 185 samples
• GSE218803 Characterization of induced cohesin loop extrusion trajectories in living cells 179 samples

Search all human RNA-seq datasets in GEO →