Cumulus cell gene expression associated with pre-ovulatory acquisition of developmental competence in bovine oocytes
Expression microarray · Bos taurus · 18 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Bos taurus
- Samples
- 18 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE79760_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA316958. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 18 more — browse all 18 samples with per-sample file links →
- GSE36605 Transcriptional profiling of cumulus cells differentiation throughout oocyte competence acquisition in the bovine ovarian follicles. 17 samples shares acquisition, competence, cumulus, bovine
- GSE31361 Gene expression profiling of in vitro matured bovine oocytes cultivated with or without cumulus cells. 8 samples shares cumulus, oocytes, bovine
- GSE21005 Expression data from different stages and types of oocytes and cumulus cells (CCs) 18 samples shares cumulus, oocytes
- GSE65269 Expression data from bovine oocyte; Identification of molecular markers for oocyte competence in bovine cummulus cells 6 samples shares competence, bovine
- GSE79886 Bovine cumulus cells transcriptome in relation with oocyte chromatin configuration of the germinal vesicle 12 samples shares cumulus, bovine
- GSE31261 Transcriptional profiling of cumulus cells entoured the oocyte after in vitro or in vivo maturation in bovine (Bos taurus) 8 samples shares cumulus, bovine
- GSE10819 Bovine adult versus prepubertal cumulus cells 8 samples shares cumulus, bovine
- GSE94338 Effect of low dose docosahexaenoic acid (DHA) on bovine cumulus cells during in vitro maturation 8 samples shares cumulus, bovine
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.