Patient-derived organoid cultures model human primary liver cancer in vitro

Direct links to NCBI, no account and no request form: the whole study as GSE84073_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 59 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA327939 and SRA study SRP077971. Searching any of these in the dataset finder brings you back here.

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• GSE318420 Immunosuppressive monocytes are enriched in hepatocellular carcinoma patients with liver dysfunction in a phase II trial of combination sorafenib and nivolumab 210 samples
• GSE281556 Lysosomal sequestration of PARP inhibitors drives heterogeneous accumulation in ovarian cancer to increase efficacy 204 samples
• GSE317605 A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer [CITE-Seq] 168 samples
• GSE270387 Single cell profiling of peripheral blood mononuclear cells in diverse men with prostate cancer reveals lethal disease-associated immune signatures 165 samples
• GSE336781 ZFP36L2 orchestrates stress-adaptive plasticity in intestinal regeneration and colorectal cancer metastasis 93 samples
• GSE284400 Gene expression and mutation profiles in advanced-stage epithelial ovarian cancer (EOC) 78 samples
• GSE234654 DDX6 reshapes the cancer RNA editome to suppress RNA-induced innate immunity 57 samples
• GSE333851 Spatial Glyco-Codes Define Human Liver Pathology and Progression 32 samples

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