Target landscape
Open Targets · retrieved 2026-09-17 · weekly12 genes recurrently implicated in basal cell carcinoma, triaged for whether anything can actually be aimed at them. The zeros are the informative rows.
Of 12 recurrently implicated genes, 3 carry any drug at all. That is a statement about these 12 gene targets, not about the disease: Basal cell carcinoma does have labelled therapy — 4 drugs, listed in the next section.
Two different questions
The table below asks what can be aimed at 12 recurrently implicated genes. That is narrower than what is approved for the disease, and narrower again than what basal cell carcinoma is actually treated with, which includes agents approved under broader indications. All three are on this page and they are kept apart deliberately.
| Gene | Drugs | Approval, and whether it reached this disease | Open Targets tractabilitycomputed from protein features and literature — a signal that a modality is worth trying, not evidence that it works | Cell therapy here |
|---|---|---|---|---|
| PTCH1 across cancers → | 0 | No drug— | antibody, protein degrader, small molecule | — |
| SMO across cancers → | 8 | 3 approvedGlasdegib, Sonidegib, VismodegibApproved in basal cell carcinoma: Sonidegib, Vismodegib.8 active of 56 basal cell carcinoma trials | antibody, protein degrader, small molecule | — |
| SUFU | 0 | No drug— | protein degrader, small molecule | — |
| GLI1 | 0 | No drug— | antibody, protein degrader, small molecule | — |
| GLI2 | 0 | No drug— | protein degrader, small molecule | — |
| TP53 across cancers → | 8 | Phase 3Alrizomadlin, Cenersen, Contusugene Ladenovec, Eprenetapopt, Idasanutlin, Navtemadlin, Siremadlin, TeprasiranNo basal cell carcinoma trial of any of these drugs | other clinical modality, protein degrader, small molecule | — |
| PTCH2 | 0 | No drug— | antibody | — |
| CDKN2A across cancers → | 0 | No drug— | — | — |
| PDCD1 across cancers → | 26 | 9 approvedCemiplimab, Dostarlimab, Nivolumab, Pembrolizumab, Retifanlimab, Serplulimab, Sintilimab, Tislelizumab, ToripalimabApproved in basal cell carcinoma: Cemiplimab.13 active of 23 basal cell carcinoma trials | antibody, other clinical modality, protein degrader, small molecule | 1 active of 1 trial |
| MYCN across cancers → | 0 | No drug— | protein degrader, small molecule | — |
| PPP6C | 0 | No drug— | protein degrader | — |
| STK19 | 0 | No drug— | — | — |
Dataset evidence counts studies in the 37-study ranked set whose title or abstract names the gene; the bar is scaled to PTCH1. Sources: Open Targets Platform and NCBI GEO, retrieved 2026-09-17. Clinical stage is the highest reached for any indication — see the per-drug indications noted in each row. Target-prioritisation reference only; not clinical or prescribing guidance.
What is actually approved here
openFDA drug labels · weekly4 drugs carry an FDA label naming basal cell carcinoma: Cemiplimab, Imiquimod, Sonidegib, Vismodegib. Separately, 9 of the drugs returned for the genes in the table above are approved only for other diseases and reach basal cell carcinoma through trials, not through their labels.
Every label that names basal cell carcinoma
| Drug | Role | What the label says |
|---|---|---|
| CemiplimabLIBTAYO | Labelled here | Basal Cell Carcinoma LIBTAYO is indicated for the treatment of adult patients with locally advanced or metastatic basal cell carcinoma (laBCC or mBCC) who have been previously treated with a hedgehog pathway inhibitor or for whom a hedgehog pathway inhibitor is not appropriate. |
| ImiquimodIMIQUIMOD, Imiquimod | Labelled here | Superficial Basal Cell Carcinoma Imiquimod Cream is indicated for the topical treatment of biopsy-confirmed, primary superficial basal cell carcinoma (sBCC) in immunocompetent adults, with a maximum tumor diameter of 2.0 cm, located on the trunk (excluding anogenital skin), neck, or extremities (excluding hands and feet), only when surgical methods are medically less appropriate and patient fol... |
| SonidegibOdomzo | Labelled here | ODOMZO is a hedgehog pathway inhibitor indicated for the treatment of adult patients with locally advanced basal cell carcinoma (BCC) that has recurred following surgery or radiation therapy, or those who are not candidates for surgery or radiation therapy. |
| VismodegibERIVEDGE | Labelled here | ERIVEDGE is indicated for the treatment of adults with metastatic basal cell carcinoma, or with locally advanced basal cell carcinoma that has recurred following surgery or who are not candidates for surgery and who are not candidates for radiation. |
19 labels match indications_and_usage:"basal cell carcinoma"; they collapse to 4 distinct molecules once salt forms, biosimilars and co-formulated hyaluronidase are merged. Source: openFDA drug label API (api.fda.gov/drug/label.json), retrieved 2026-09-17. Labels change; this reflects the current label text, not the approval history. Not prescribing guidance.
Cell therapy against PD-1
ClinicalTrials.gov · retrieved 2026-09-17 · weeklyPD-1 is the busiest cell-therapy antigen in basal cell carcinoma: 1 registered trials, 1 still active. It has no gene entry of its own and is reached through PDCD1: the receptor PD-1 encodes; cemiplimab is approved after, or for those who cannot take, a Hedgehog inhibitor.
| Trial | Phase | Status | Title | Last update |
|---|---|---|---|---|
| NCT06398418 | 1 | Recruiting | R-5780-01 In Combination With PD-1 Checkpoint Inhibitors (Checkpoint Protein on Immune Cells Called T Cells) in Patients With Solid Tumors | 2026-09-04 |
1 of 1 shown, most recently active first. Source: ClinicalTrials.gov API v2, retrieved 2026-09-17. Trials are matched on the antigen named in the title or intervention, so a trial stating only a product code is missed.
Research momentum
PubMed MeSH · monthlyEvery term below is a share of the basal cell carcinoma literature, not a count, because the field itself grew: 2015–2018 (n=1,350) against 2021–2025 (n=1,508). A topic whose papers doubled while the field doubled has not risen.
Rising, with a real baseline
| MeSH term | 2015–18 | 2021–25 | Change | Share now |
|---|---|---|---|---|
| Tumor Microenvironment | 0.44% | 1.33% | 2.98× | 20 papers |
| Quality of Life | 0.59% | 1.53% | 2.57× | 23 papers |
| Sebaceous Gland Neoplasms | 0.37% | 0.93% | 2.51× | 14 papers |
| Eyelids | 1.78% | 3.58% | 2.01× | 54 papers |
| Margins of Excision | 2.59% | 4.91% | 1.89× | 74 papers |
| Ultrasonography | 0.67% | 1.26% | 1.89× | 19 papers |
| Biphenyl Compounds | 2.3% | 4.24% | 1.85× | 64 papers |
| Curettage | 0.52% | 0.93% | 1.79× | 14 papers |
| Hedgehog Proteins | 6.3% | 10.74% | 1.71× | 162 papers |
| Cicatrix | 0.81% | 1.26% | 1.55× | 19 papers |
Cooling
| MeSH term | 2015–18 | 2021–25 | Change | Share now |
|---|---|---|---|---|
| Neoplasm Staging | 4.67% | 0.8% | 0.17× | 12 papers |
| Neoplasm Invasiveness | 4.44% | 1.06% | 0.24× | 16 papers |
| Prognosis | 4.37% | 1.13% | 0.26× | 17 papers |
| Cell Proliferation | 2.67% | 0.86% | 0.32× | 13 papers |
| Skin Transplantation | 2.52% | 0.8% | 0.32× | 12 papers |
| Facial Neoplasms | 6.15% | 2.06% | 0.33× | 31 papers |
Biggest topics now
| MeSH term | 2015–18 | 2021–25 | Change | Share now |
|---|---|---|---|---|
| Skin Neoplasms | 78.67% | 88.59% | 1.13× | 1336 papers |
| Mohs Surgery | 11.85% | 14.92% | 1.26× | 225 papers |
| Hedgehog Proteins | 6.3% | 10.74% | 1.71× | 162 papers |
| Antineoplastic Agents | 11.33% | 10.54% | 0.93× | 159 papers |
| Neoplasm Recurrence, Local | 8.52% | 10.21% | 1.2× | 154 papers |
| Treatment Outcome | 13.78% | 10.15% | 0.74× | 153 papers |
| Pyridines | 10.52% | 9.35% | 0.89× | 141 papers |
| Basal Cell Nevus Syndrome | 11.56% | 9.08% | 0.79× | 137 papers |
| Anilides | 9.33% | 7.63% | 0.82× | 115 papers |
| Dermoscopy | 7.48% | 5.57% | 0.74× | 84 papers |
Publication mix
| Type | 2015–18 | 2021–25 |
|---|---|---|
| Clinical Trial | 0.0% | 0.1% |
| Randomized Controlled Trial | 2.4% | 1.6% |
| Review | 9.8% | 7.6% |
| Meta-Analysis | 0.9% | 0.5% |
| Case Reports | 0.0% | 4.2% |
Query: Basal Cell Carcinoma[MeSH Major Topic] NOT ("Melanoma"[MeSH] OR "Carcinoma, Squamous Cell"[MeSH] OR "Keratosis, Actinic"[MeSH] OR "Carcinoma, Merkel Cell"[MeSH]). Terms need at least 12 papers in the recent window and, in the rising table, at least 5 in the earlier one — a term going from 1 paper to 12 is a large fold change and no evidence of anything. Ubiquitous descriptors (Humans, Animals, age bands) and the disease’s own term are dropped. Source: PubMed MeSH, retrieved 2026-09-17.
Disease burden
What the public sources count, and how closely each category matches this disease. The same figures for every disease on the site are on one table.
| Measure | Value | Match | What it counts |
|---|---|---|---|
| New cases each year | 5,400,000 cancers/year (lesions, not people) | proxy | counts basal and squamous cell skin cancer (lesions, not people), which is broader than this disease American Cancer Society, Key Statistics for Basal and Squamous Cell Skin Cancers, retrieved 2026-09-17 |
| New cases each year, estimated | 4,320,000 cancers/year (lesions, not people) | derived proxy | 5,400,000 x 0.8, from basal and squamous cell skin cancer (lesions, not people) American Cancer Society, Key Statistics for Basal and Squamous Cell Skin Cancers, retrieved 2026-09-17 |
| Deaths each year | — | not published | Not published: "deaths from these cancers are very rare" and are not tracked by registries. |
| Five-year relative survival | — | not published | Not published; the disease is not registered, so no relative survival exists. The page says the tumours "rarely spread to other parts of the body". |
| Median age at diagnosis | — | not published | Not published; the page says risk "goes up as people get older". |
Years of life lost: not computed. Years of life lost needs survival, age at diagnosis and a case count. five_year_relative_survival, median_age_at_diagnosis is not recorded for this disease.
Funding
NIH RePORTER · quarterlyNIH obligations naming basal cell carcinoma, after removing the 5,432 records across all years that matched the search but are about something else. That filter is not cosmetic: without it this section reports another field’s funding as this disease’s.
NIH obligations by fiscal year
| Year | Obligations | Awards | Distinct projects | Dropped as off-topic |
|---|---|---|---|---|
| FY2013 | $4.9M | 16 | 16 | 104 |
| FY2014 | $5.3M | 21 | 21 | 95 |
| FY2015 | $6.7M | 24 | 23 | 97 |
| FY2016 | $5.7M | 23 | 23 | 414 |
| FY2017 | $8.2M | 27 | 24 | 493 |
| FY2018 | $7.5M | 21 | 19 | 546 |
| FY2019 | $6.2M | 21 | 17 | 554 |
| FY2020 | $8.3M | 20 | 19 | 536 |
| FY2021 | $6.7M | 18 | 15 | 548 |
| FY2022 | $5.0M | 16 | 15 | 554 |
| FY2023 | $4.1M | 10 | 10 | 525 |
| FY2024 | $2.9M | 7 | 7 | 498 |
| FY2025 | $5.2M | 10 | 10 | 468 |
Where FY2025 money went
| Institution | Obligations | Awards |
|---|---|---|
| Division Of Basic Sciences - Nci | $1.3M | 1 |
| Stanford University | $1.0M | 2 |
| Surgivance, Inc. | $1.0M | 1 |
| Utah State Higher Education System--University Of Utah | $0.8M | 2 |
| University Of Alabama At Birmingham | $0.6M | 1 |
| University Of Arizona | $0.5M | 1 |
| Va Greater Los Angeles Healthcare System | $0.0M | 1 |
| Veterans Health Administration | $0.0M | 1 |
Text search basal cell carcinoma over project title, terms and abstract, per fiscal year. Awards are individual funding actions; distinct projects collapse them by core project number, so a multi-year grant counts once. The most recent year may be incomplete. Source: NIH RePORTER, retrieved 2026-09-17.
Who funds it, FY2025
The total says how much. These say who from, through what kind of award, and to whom — which a dollar figure cannot.
NIH institutes
Projects by administering institute. The rows above are the top 3 and account for 10 of 10.
Award mechanisms
R01 is an investigator-initiated grant; ZIA is NIH intramural, meaning the work happens inside NIH rather than being funded outside it. The rows above are the top 8 and account for 10 of 10.
Where it lands
Share of $5.2M in FY2025. The top three hold 62%.
Public datasets, ranked
NCBI GEO + Europe PMC + iCite · weekly120 human GEO series match basal cell carcinoma. Keyword relevance cannot tell a 72-sample patient cohort from a six-well cell-line experiment, so this ranking scores four things GEO does not expose: how often the accession is named in full-text papers, field-normalised citation impact, clinical annotation, and cohort type.
Composition of the 37-study ranked set
Established
high reuse, older| Accession | Study | Samples | MentionsEurope PMC | RCR | Evidence |
|---|---|---|---|---|---|
| GSE58377 | SMO variants explain the majority of drug resistance in basal cell carcinoma2015 · sequencing | 107 | 11 | 10.3 | APT 0.95molecularSMO347 cites |
| GSE42109 | Identification of anaplastic lymphoma kinase as a candidate of new therapeutic target for BCC2013 · array | 21 | 11 | 0.6 | patient cohortAPT 0.25molecularGLI1HEDGEHOGSMOOTHENED20 cites |
| GSE6520 | Microarray analysis shows multiple signaling pathways are involved in basal cell carcinoma growth2006 · array | 31 | 3 | 2.4 | patient cohortAPT 0.5survivalmolecularHEDGEHOG99 cites |
| GSE125285 | Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas2020 · sequencing | 70 | 13 | 1.0 | APT 0.526 cites |
| GSE34535 | Microarray analysis of microRNA expression in basal cell carcinoma2012 · array | 14 | 3 | 4.7 | patient cohortAPT 0.75164 cites |
| GSE5121 | Imiquimod treated Basal Cell Carcinoma2006 · array | 72 | 1 | 1.5 | patient cohortAPT 0.75molecularIMIQUIMOD80 cites |
| GSE53462 | Molecular classification of non-melanoma skin cancer by gene expression profiling2014 · array | 26 | 15 | 0.8 | APT 0.524 cites |
| GSE156855 | AP-1 and TGFb cooperativity drives non-canonical Hedgehog signaling in resistant basal cell carcinoma2020 · chromatin | 38 | 15 | 2.3 | APT 0.75molecularHEDGEHOG58 cites |
Recent
2022 onward, by score| Accession | Study | Samples | MentionsEurope PMC | RCR | Evidence |
|---|---|---|---|---|---|
| GSE268728 | A neoadjuvant, phase II trial demonstrates efficacy and tolerability of Talimogene laherparepvec in cutaneous basal cell carcinoma (NeoBCC trial)2024 · sequencing | 12 | 1 | 2.0 | patient cohortAPT 0.05stagemolecularONCOLYTICT-VECTALIMOGENE9 cites |
| GSE210648 | Integrated multi-omics reveals cellular and molecular interactions governing the invasive niche of basal cell carcinoma (Digital Spatial Profiling)2022 · single-cell | 95 | 8 | 3.0 | APT 0.552 cites |
| GSE269601 | COL10A1 expression distinguishes a subset of cancer-associated fibroblasts present in the stroma of high-risk basal cell carcinoma2024 · single-cell | 21 | 1 | 1.4 | patient cohortAPT 0.05survivalstage10 cites |
| GSE196292 | Immune cell gene expression in healthy, basal cell carcinoma and melanoma skin2022 · sequencing | 40 | 2 | 1.8 | APT 0.2522 cites |
| GSE180706 | RNA-seq analysis of sporadic and Basal Cell Nevus Syndrome-associated odontogenic keratocysts (OKCs)2022 · sequencing | 18 | 1 | 0.8 | patient cohortAPT 0.257 cites |
| GSE233744 | The Hedgehog gene expression program regulates lipid metabolism in basal cell carcinoma and medulloblastoma2023 · sequencing | 99 | 0 | — | molecularGLI1HEDGEHOGPTCH1 |
Sources: NCBI GEO + Europe PMC + iCite, retrieved 2026-09-17. SubSeries are collapsed to one row per study by linked PMID. Of 120 series retrieved, 26 were dropped by the profile’s exclusion rules and 46 named the disease only in passing. The ranked set is a relevance-ranked sample, not a census, so the composition figures describe the sample only.
Where the gaps are
Derived from the sections above · recomputed on every refreshEach card below is a disagreement between two of the tables on this page — a drug that exists but was never tried here, a target that looks tested and was not, a gene with no drug whose product has a busy clinical programme. They are computed from the same facts as the tables, so they cannot contradict them.
PTCH1
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
SUFU
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
GLI1
No drug in any database targets GLI1, while 29 trials target Hedgehog — the antigen it produces. A gene-centric search finds nothing here and concludes wrongly.
GLI2
No drug in any database targets GLI2, while 29 trials target Hedgehog — the antigen it produces. A gene-centric search finds nothing here and concludes wrongly.
PTCH2
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
CDKN2A
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
MYCN
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
PPP6C
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
STK19
No drug, no trial, no clinical programme of any kind. Whatever the biology says, nothing has been built.
How a machine reads this page
StaticThis page is written to be quoted correctly by a model as much as read by a person. The same facts are available as JSON at the sibling URL below, which is what to cite. The cross-disease layer — burden, genes, drugs and antigens across every briefing — is described at /disease/api.json.
Fully server-rendered
Every figure is in the HTML at first byte. No JavaScript runs, no figure is fetched after load, and nothing on this page requires a renderer to see.
Every number carries a source
Each section names the API it came from and the date it was retrieved: Open Targets (2026-09-17), ClinicalTrials.gov (2026-09-17), openFDA (2026-09-17), NCBI GEO (2026-09-17), PubMed (2026-09-17), NIH RePORTER (2026-09-17).
Negatives stated explicitly
Where nothing exists for basal cell carcinoma — no drug, no trial, no approval — the page says so in those words rather than omitting the row. An absent row is unquotable; a stated negative is the finding.
Denominators, not just percentages
Every share is printed with the count and the total it came from, so a figure can be checked rather than taken.
The filters are published
5 exclusion patterns are applied to free text before anything is ranked, because none: no line is in regular use is used as a model system in basal cell carcinoma. What was removed and why is stated in each section rather than silently applied.
{
"disease": "Basal cell carcinoma",
"mesh": "Basal Cell Carcinoma",
"facts": "https://usebiotransfer.org/disease/basal-cell-carcinoma.json",
"methods": "https://usebiotransfer.org/methods/",
"all_diseases": "https://usebiotransfer.org/disease/api.json",
"note": "Every figure on the page is in that JSON with its source and retrieval date. Quote from it rather than from the HTML."
}