Single-cell RNAseq (SMART-seq2) of wild-type (TLAB) and MZoep (tz57) zebrafish embryos at 50% epiboly stage
Direct links to NCBI, no account and no request form: the whole study as GSE106466_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 416 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA416939 and SRA study SRP123526. Searching any of these in the dataset finder brings you back here.
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+ 416 more — browse all 416 samples with per-sample file links →
- GSE112824 10x analysis of wild-type (TLAB) and MZoep zebrafish embryos at 6-somite stage 2 samples
- GSE106474 Drop-seq analysis of wild-type (TLAB) zebrafish embryos from high to 6-somite stage (12 timepoints) 28 samples
- GSE22830 High-throughput sequencing of mRNA from oocyte, 1 cell, 16/32 cells, 128/256 cells, 3.5hpf and 5.3hpf zebrafish embryos (Wild type; AB line) 6 samples
- GSE111882 RNAseq of wild type zebrafish germline (ovary, oocyte, testis) 6 samples
- GSE224113 A single-cell map of maternal and zygotic mRNA dynamics during cell-type specification in zebrafish embryos [SLAM-seq] 4 samples
- GSE292682 Transcriptome profiling of tendon fibroblasts at the onset of embryonic muscle contraction reveals novel force-responsive genes. FAC sorted tenocytes from 36 hpf vs. 48 hpf zebrafish embryos bulk RNAseq dataset 11 samples
- GSE106587 Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis 446 samples
- GSE162415 Temporal transcriptome in Pou5f3, Nanog and Sox19b mutant zebrafish embryos 232 samples
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