Drop-seq analysis of wild-type (TLAB) zebrafish embryos from high to 6-somite stage (12 timepoints)
Direct links to NCBI, no account and no request form: the whole study as GSE106474_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 28 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA417290 and SRA study SRP124289. Searching any of these in the dataset finder brings you back here.
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+ 28 more — browse all 28 samples with per-sample file links →
- GSE112824 10x analysis of wild-type (TLAB) and MZoep zebrafish embryos at 6-somite stage 2 samples
- GSE106466 Single-cell RNAseq (SMART-seq2) of wild-type (TLAB) and MZoep (tz57) zebrafish embryos at 50% epiboly stage 416 samples
- GSE22830 High-throughput sequencing of mRNA from oocyte, 1 cell, 16/32 cells, 128/256 cells, 3.5hpf and 5.3hpf zebrafish embryos (Wild type; AB line) 6 samples
- GSE111882 RNAseq of wild type zebrafish germline (ovary, oocyte, testis) 6 samples
- GSE224113 A single-cell map of maternal and zygotic mRNA dynamics during cell-type specification in zebrafish embryos [SLAM-seq] 4 samples
- GSE162415 Temporal transcriptome in Pou5f3, Nanog and Sox19b mutant zebrafish embryos 232 samples
- GSE137424 Temporal transcriptome in Pou5f3 and Sox19b mutant zebrafish embryos 101 samples
- GSE84601 RNA-seq analysis comparing WT, Rad21 MO and CTCF MO zebrafish embryos at stages (2.5, 3.3, 4.5, 5.3, 10 hpf) pre and post ZGA (zygotic genome activation) 45 samples
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