RNAseq of wild type zebrafish germline (ovary, oocyte, testis)
Direct links to NCBI, no account and no request form: the whole study as GSE111882_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA438478 and SRA study SRP135774. Searching any of these in the dataset finder brings you back here.
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+ 6 more — browse all 6 samples with per-sample file links →
- GSE106466 Single-cell RNAseq (SMART-seq2) of wild-type (TLAB) and MZoep (tz57) zebrafish embryos at 50% epiboly stage 416 samples
- GSE22830 High-throughput sequencing of mRNA from oocyte, 1 cell, 16/32 cells, 128/256 cells, 3.5hpf and 5.3hpf zebrafish embryos (Wild type; AB line) 6 samples
- GSE106474 Drop-seq analysis of wild-type (TLAB) zebrafish embryos from high to 6-somite stage (12 timepoints) 28 samples
- GSE112824 10x analysis of wild-type (TLAB) and MZoep zebrafish embryos at 6-somite stage 2 samples
- GSE147112 Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition 114 samples
- GSE120643 Transcriptomics analysis of gene expression in wide type, ybx1 MO, pabpc1a MO zebrafish embryo sample. 28 samples
- GSE292682 Transcriptome profiling of tendon fibroblasts at the onset of embryonic muscle contraction reveals novel force-responsive genes. FAC sorted tenocytes from 36 hpf vs. 48 hpf zebrafish embryos bulk RNAseq dataset 11 samples
- GSE224113 A single-cell map of maternal and zygotic mRNA dynamics during cell-type specification in zebrafish embryos [SLAM-seq] 4 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.