Microarray analysis of human monocytes infected with Francisella tularensis
Expression microarray · human · 14 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 14 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE12108_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA113801. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 14 more — browse all 14 samples with per-sample file links →
- GSE306199 Expression profiling of THP-1 cells with and without infection by Francisella tularensis and with or without treatment with Dillapiole 20 samples shares francisella, tularensis
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- GSE76427 Microarray expression data for tumor and adjacent non-tumor tissues from hepatocellular carcinoma patients 167 samples shares microarray
- GSE56047 Transcriptomics and methylomics of human monocytes 2832 samples shares monocytes
- GSE101448 Microarray gene-expression data to identify a robust biomarker signature in PDAC and validate it in formalin-fixed paraffin-embedded tissue material. 43 samples shares microarray
- GSE149507 Microarray expression data of 18 pairs of small cell lung cancer (sclc) and tumor and adjacent lung tissues 36 samples shares microarray
- GSE39642 NanoString nCounter immune-related gene expression in blood sorted CD14+CD16- monocytes from sALS, fALS and HC subjects 24 samples shares monocytes
- GSE56046 Transcriptomics and methylomics of human monocytes [methylome] 1202 samples shares monocytes
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.