Nanopore Direct RNA sequencing of mice hippocampal brain tissues

Direct links to NCBI, no account and no request form: the whole study as GSE171312_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA719114 and SRA study SRP313263. Searching any of these in the dataset finder brings you back here.

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+ 6 more — browse all 6 samples with per-sample file links →

• GSE326452 Bulk RNA-seq of mouse brain following closed head injury: role of IL-1R1 signaling 200 samples
• GSE185862 A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation 95 samples
• GSE93130 Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function 71 samples
• GSE261492 Hypertension Promotes Neuroinflammation, Brain Injury and Cognitive Impairment 48 samples
• GSE249405 Spatial mapping of RNA turnover kinetics in the mouse brain 38 samples
• GSE275035 RNA modifications, alternative splicing and circular RNA landscape in the mouse brain: inosine and beyond 27 samples
• GSE339012 Mega-Enhancers Compartmentalize Transcriptionally Active Long Genes in the Brain [ChIP-Seq] 22 samples
• GSE328495 Gene expression + ATAC profiling of trisomic hippocampal neurons upon SAHA treatment [ATAC-seq] 16 samples

Search all mouse RNA-seq datasets in GEO →