Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells
Expression microarray · mouse · 63 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Mus musculus (mouse)
- Samples
- 63 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE20576_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA125269. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 63 more — browse all 63 samples with per-sample file links →
- GSE10806 Pluripotent stem cells induced from adult neural stem cells by reprogramming with two factors 11 samples shares pluripotent, induced, stem
- GSE333520 The flame retardant triphenyl phosphate induces varying responses in genetically diverse mouse induced pluripotent stem cells 436 samples shares pluripotent, induced, stem
- GSE267262 Genetic variation modulates aberrant DNA hypomethylation in naïve pluripotent stem cells. 12 samples shares pluripotent, aberrant, stem
- GSE199855 shRNA-mediated silencing of candidate pluripotency regulators in mouse epibladst stem cells 798 samples shares silencing, stem
- GSE247946 Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation 132 samples shares chromosome, induced
- GSE292289 H3K79 methylation and H3K36 trimethylation synergistically regulate gene expression in pluripotent stem cells 94 samples shares pluripotent, stem
- GSE280606 EHMT2 represses totipotency- and differentiation-associated genes in pluripotent stem cells through distinct regulatory modes 91 samples shares pluripotent, stem
- GSE335605 A PLURIPOTENT STEM CELL PLATFORM FOR IN VITRO SYSTEMS GENETICS STUDIES OF MOUSE DEVELOPMENT 72 samples shares pluripotent, stem
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.