Chromatin landscape alteration uncovers multiple transcriptional circuits during memory CD8+ T cell differentiation
Direct links to NCBI, no account and no request form: the whole study as GSE226177_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.
Also filed as BioProject PRJNA939126 and SRA study SRP424449. Searching any of these in the dataset finder brings you back here.
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- GSE48759 Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription 139 samples
- GSE271760 Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development 88 samples
- GSE72720 CTCF binding polarity determines chromatin looping 506 samples
- GSE236580 Adipose tissue retains an epigenetic memory of obesity after weight loss 135 samples
- GSE163012 Loop extrusion by cohesin plays a role in enhancer-activated gene expression early in differentiation 109 samples
- GSE200114 Dynamic promoter-enhancer contacts contribute to spatiotemporal gene expression during mouse fetal development 70 samples
- GSE55914 RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent pre-mRNAs and chromatin sites 46 samples
- GSE289568 Feed-forward regulatory loops by NR5A2 ensure robust gene activation during pre-implantation development [CUT&Tag, CUT&RUN, TIP-seq] 43 samples
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