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Adipose tissue retains an epigenetic memory of obesity after weight loss [snRNAseq]

GSE236579 Mus musculus Expression profiling by high throughput sequencing 9 samples Submitted 2024/11/14 Platform GPL24247
Summary
Reducing body weight to improve metabolic health and related comorbidities is a primary goal in treating obesity. However, maintaining weight loss is a considerable challenge, especially as the body appears to retain an obesogenic memory that defends against body weight changes. Overcoming this barrier for long-term treatment success is difficult because the molecular mechanisms underpinning this phenomenon remain largely unknown. Here, by using single-nuclei RNA-sequencing, we show that both human and mouse adipose tissue retain cellular transcriptional changes after appreciable weight loss. Furthermore, we find persistent obesity-induced alterations in the mouse adipocyte epigenome, negatively affecting their function and response to metabolic stimuli. Mice carrying this obesogenic memory show accelerated rebound weight gain, and the epigenetic memory can explain future transcriptional deregulation in adipocytes in response to further high-fat diet feeding. In summary, our findings indicate the existence of an obesogenic memory, largely based on stable epigenetic changes, in mouse adipocytes, and likely other cell types. These changes appear to prime cells for pathological responses in an obesogenic environment, contributing to the problematic "yo-yo" effect often seen with dieting. Targeting these changes in the future could improve long-term weight management and health outcomes.
Published in
Adipose tissue retains an epigenetic memory of obesity after weight loss
Hinte LC, Castellano-Castillo D, Ghosh A et al. · Nature 2024 · PMID 39558077 · doi:10.1038/s41586-024-08165-7
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Direct links to NCBI, no account and no request form: the whole study as GSE236579_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 9 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA991596 and SRA study SRP447487. Searching any of these in the dataset finder brings you back here.

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