Epigenome and transcriptome of naive pluripotent mouse embryonic stem (ES) cells cultured in 2i serum-free medium

Direct links to NCBI, no account and no request form: the whole study as GSE23943_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 41 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA130405 and SRA study SRP003412. Searching any of these in the dataset finder brings you back here.

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+ 41 more — browse all 41 samples with per-sample file links →

• GSE280606 EHMT2 represses totipotency- and differentiation-associated genes in pluripotent stem cells through distinct regulatory modes 91 samples
• GSE293709 Transcriptome analysis in the prefrontal cortex of different ASD mouse models treated with drug 1565 samples
• GSE309993 Effector differentiation by stem-like intraepithelial γδ T cells is required for host defense against infection 25 samples
• GSE292862 Modelling mouse embryogenesis from chemically induced totipotent stem cells 22 samples
• GSE263285 BMAL1 represses transposable elements independently of CLOCK in pluripotent cells 20 samples
• GSE237260 Transcriptome Analysis Reveals Gene Expression Changes in a mouse Model of Hyperoxia-induced acute lung injury 12 samples
• GSE294832 Modular neuroinflammatory network discovery from large-scale phenotypic screening in genetically heterogeneous mice [part10] 1000 samples
• GSE326100 scRNA-seq of mouse cochlea organoid cells 768 samples

Search all mouse ChIP / ATAC / CUT&Tag datasets in GEO →